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SRX9917935: GSM5030043: Priming.2.4_Rabid; Mus musculus; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 29.4M spots, 2.4G bases, 793.8Mb downloads

Submitted by: NCBI (GEO)
Study: RABID barcodes from priming EAE astrocyte networks
show Abstracthide Abstract
Tracing astrocyte networks in EAE priming in B6 mice Overall design: Mice harvested during EAE priming phase (n=3). Sorting of mCherry+ cells analyzed at 7-8 dpi of Rab-DG-mCherry-BC transduced at 7 days post-EAE induction.
Sample: Priming.2.4_Rabid
SAMN17493399 • SRS8095024 • All experiments • All runs
Organism: Mus musculus
Library:
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Each CNS was isolated per mouse. A cell suspension was generated by papain digestion, neutralization, and 70um filtration of cell extract. Cells were centrifuged, labeled with Miltenyi anti-Dead Cell and anti-myelin kits, then magnetically purified and washed. Cells were sorted by flow cytometry based on mCherry fluorescence. Post-sort, cells were washed then processed by inDrop Libraries were created according to the InDrop v3 protocol derived from Klein et al. Cell 2015. inDrop scRNA-Seq
Experiment attributes:
GEO Accession: GSM5030043
Links:
Runs: 1 run, 29.4M spots, 2.4G bases, 793.8Mb
Run# of Spots# of BasesSizePublished
SRR1350630929,447,4042.4G793.8Mb2021-04-22

ID:
12977430

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